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《工程(英文)》 >> 2020年 第6卷 第5期 doi: 10.1016/j.eng.2020.03.004

通过定量分析植物初级代谢产物和酶代谢库发现除草剂新作用位点

a Agricultural Biology, College of Agricultural Sciences, Colorado State University, Fort Collins, CO 80523, USA
b Natural Products Utilization Research, Agricultural Research Service, United States Department of Agriculture, University, MS 38677, USA

收稿日期: 2018-12-24 修回日期: 2019-04-15 录用日期: 2019-07-11 发布日期: 2020-03-14

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摘要

自20世纪80年代以来,具有新分子作用位点(SOA)的除草剂一直没有被发现。从那时起,杂草对大多数商用除草剂产生了广谱抗性,这极大地增加了对具有新SOA的除草剂的需求。本文讨论了两种未被尝试过的方法,用于发现除草剂的新SOA。一些初级代谢中间产物(如原卟啉IX和鞘氨醇碱)对植物有毒性,因此,在植物体内,这些化合物的浓度水平非常低。确定所有初级代谢产物的植物毒性和代谢库大小,有利于识别相关SOA。本文讨论的发现除草剂的第一种新方法是研究导致植物毒性化合物积累的SOA,第二种方法是识别体内酶水平非常低的潜在SOA。我们知道,SOA的酶分子数量越多,杀死植物所需的除草剂就越多。现代蛋白质组学方法可以识别酶水平较低的SOA,为除草剂的发现提供依据。这些方法可能有助于发现与天然化合物更紧密相关并且可以在低剂量下使用的除草剂。

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参考文献

[ 1 ] Duke SO. Why have no new herbicides modes of action appeared in recent years? Pest Manage Sci 2012;68(4):505–12. 链接1

[ 2 ] Heap I. The international survey of herbicide resistant weeds [Internet]. WeedScience; c1993–2020 [cited 2019 Nov 25]. Available from: www. weedscience.org. 链接1

[ 3 ] Copping L. The evolution of crop protection companies. Outlooks Pest Manage 2018;29(1):25–7. 链接1

[ 4 ] Lee DL, Prisbylla MP, Cromartie TH, Dagarin DP, Howard SW, Provan WM, et al. The discovery and structural requirements of inhibitors of p-hydroxyphenylpyruvate dioxygenase. Weed Sci 1997;45:601–9. 链接1

[ 5 ] Dayan FE, Duke SO, Sauldubois A, Singh N, McCurdy C, Cantrell CL. pHydroxyphenylpyruvate dioxygenase is a herbicidal target site for b-triketones from Leptospermum scoparium. Phytochemistry 2007;68(14):2004–14. 链接1

[ 6 ] Dayan FE, Duke SO. Natural compounds as next generation herbicides. Plant Physiol 2014;166(3):1090–105. 链接1

[ 7 ] Duke SO, Baerson SR, Gressel J. Genomics and weeds: a synthesis. In: Stewart CN, editor. Weed and invasive plant genomics. Ames: Blackwell Publishing; 2009. p. 221–47. 链接1

[ 8 ] Yan Y, Liu Q, Zang X, Yuan S, Bat-Erdene U, Nguyen C, et al. Resistance-genedirected discovery of a natural-product herbicide with a new mode of action. Nature 2018;559(7714):415–8. 链接1

[ 9 ] Cundliffe E. How antibiotic-producing organisms avoid suicide. Annu Rev Microbiol 1989;43(1):207–33. 链接1

[10] Duke SO, Stidham MA, Dayan FE. A novel genomic approach to herbicide and herbicide mode of action discovery. Pest Manage Sci 2019;75(2):314–7. 链接1

[11] Dayan FE, Duke SO. Protoporphyrinogen oxidase-inhibiting herbicides. In: Haye’s handbook of pesticide toxicology. San Diego: Academic Press; 2010. p. 1733–51. 链接1

[12] Tan S, Evans R, Singh B. Herbicidal inhibitors of amino acid biosynthesis and herbicide-tolerant crops. Amino Acids 2006;30(2):195–204. 链接1

[13] Amorim Franco TM, Blanchard JS. Bacterial branched-chain amino acid biosynthesis: structures, mechanisms, and drugability. Biochemistry 2017;56 (44):5849–65. 链接1

[14] Wittenbach VA, Abell LM. Inhibitors of valine, leucine, and isoleucine synthesis. In: Singh BK, editor. Plant amino acids: biochemistry and biotechnology. New York: Marcel Dekker; 1999. p. 385–416. 链接1

[15] Zhou Q, Liu W, Zhang Y, Liu KK. Action mechanisms of acetolactate synthaseinhibiting herbicides. Pestic Biochem Physiol 2007;89(2):89–96. 链接1

[16] Shaner DL, Singh BK. Phytotoxicity of acetohydroxyacid synthase inhibitors is not due to accumulation of 2-ketobutyrate and/or 2-aminobutyrate. Plant Physiol 1993;103(4):1221–6. 链接1

[17] Orcaray L, Igal M, Marino D, Zabalza A, Royuela M. The possible role of quinate in the mode of action of glyphosate and acetolactate synthase inhibitors. Pest Manage Sci 2010;66(3):262–9. 链接1

[18] Abbas HK, Tanaka T, Duke SO, Porter JK, Wray EM, Hodges L, et al. Fumonisinand AAL-toxin-induced disruption of sphingolipid metabolism with accumulation of free sphingoid bases. Plant Physiol 1994;106(3):1085–93. 链接1

[19] Tanaka T, Abbas HK, Duke SO. Structure-dependent phytotoxicity of fumonisins and related compounds in a duckweed bioassay. Phytochemistry 1993;33(4):779–85. 链接1

[20] Lynch DV, Dunn TM. An introduction to plant sphingolipids and are review of recent advances in understanding their metabolism and function. New Phytol 2004;161(3):677–702. 链接1

[21] Abbas HK, Duke SO, Shier WT, Duke MV. Inhibition of ceramide synthesis in plants by phytotoxins. In: Upadhyay RK, editor. Advances in microbial toxin research and its biotechnological exploitation. Boston: Springer; 2002. p. 211–29. 链接1

[22] Wang H, Li J, Bostock RM, Gilchrist DG. Apoptosis: a functional paradigm for programmed plant cell death induced by a host-selective phytotoxin and invoked during development. Plant Cell 1996;8(3):375–91. 链接1

[23] Foyer CH, Noctor G. Oxidant and antioxidant signaling on plants: a reevaluation of the concept of oxidative stress in a physiological context. Plant Cell Environ 2005;28(8):1056–71. 链接1

[24] Bernard SM, Habash DZ. The importance of cytosolic glutamine synthetase in nitrogen assimilation and recycling. New Phytol 2009;182(3):608–20. 链接1

[25] McNally SF, Hirel B, Gadal P, Mann AF, Stewart GR. Glutamine synthetases of higher plants: evidence for a specific isoform content related to their possible physiological role and their compartmentation within the leaf. Plant Physiol 1983;72(1):22–5. 链接1

[26] Edwards JW, Walker EL, Coruzzi GM. Cell-specific expression in transgenic plants reveals nonoverlapping roles for chloroplast and cytosolic glutamine synthetase. Proc Natl Acad Sci USA 1990;87(9):3459–63. 链接1

[27] Kamachi K, Yamaya T, Hayakawa T, Mae T, Ojima K. Vascular bundle-specific localization of cytosolic glutamine synthetase in rice leaves. Plant Physiol 1992;99(4):1481–6. 链接1

[28] Takano HK, Beffa R, Preston C, Westra P, Dayan FE. Reactive oxygen species trigger the fast action of glufosinate. Planta 2019;249(6):1837–49. 链接1

[29] Johansson L, Larsson CM. Relationship between inhibition of CO2 fixation and glutamine synthetase inactivation in Lemna gibba L. treated with L-methionine-D,L-sulphoximine (MSO). J Exp Bot 1986;37(2):221–9. 链接1

[30] Lu Y, Li Y, Yang Q, Zhang Z, Chen Y, Zhang S, et al. Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice. Physiol Plant 2014;150(3):463–76. 链接1

[31] Duke SO. The history and current status of glyphosate. Pest Manage Sci 2018;74(5):1027–34. 链接1

[32] Duke SO, Baerson SR, Rimando AM. Herbicides: glyphosate. In: Plimmer JR, editor. Encyclopedia of agrochemicals. Hobokena: John Wiley & Sons; 2003. 链接1

[33] Bentley R, Haslam E. The shikimate pathway—a metabolic tree with many branches. Crit Rev Biochem Mol Biol 1990;25(5):307–84. 链接1

[34] Shaner DL, Nadler-Hassar T, Henry WB, Koger CH. A rapid in vivo shikimate accumulation assay with excised leaf discs. Weed Sci 2005;53(6): 769–74. 链接1

[35] Zulet A, Zabalza A, Royuela M. Phytotoxic and metabolic effects of exogenous quinate on Pisum sativum L. J Plant Growth Regul 2013;32(4):779–88. 链接1

[36] Zabalza A, Orcaray L, Fernández-Escalada M, Zulet-González A, Royuela M. The pattern of shikimate pathway and phenylpropanoids after inhibition by glyphosate or quinate feeding in pea roots. Pestic Biochem Physiol 2017;141:96–102. 链接1

[37] Ghosh S, Chisti Y, Banerjee UC. Production of shikimic acid. Biotechnol Adv 2012;30(6):1425–31. 链接1

[38] Enrich LB, Scheuermann ML, Mohadjer A, Matthias KR, Eller CF, Newman MS, et al. Liquidamber styraciflua: a renewable source of shikimic acid. Tetrahedron Lett 2008;49(16):2503–5. 链接1

[39] Council of Europe. European pharmacopedia. 3rd ed. Strabourg: Council of Europe; 1997. 链接1

[40] Duke SO, Rimando AM, Duke MV, Paul RN, Ferreira JFS, Smeda RJ. Sequestration of phytotoxins by plants: implications for biosynthetic production. In: Cutler HG, Cutler SJ, editors. Biologically active natural products: agrochemicals. Boca Raton: CRC Press; 1999. p. 127–36. 链接1

[41] Cornish-Brown A. Why is uncompetitive inhibition so rare? A possible explanation, with implications for the design of drugs and pesticides. FEBS Lett 1986;203:25–37. 链接1

[42] Jessing K, Duke SO, Cedergreeen N. Potential ecological roles of artemisinin produced by Artemisia anna L. J Chem Ecol 2014;40(2):100–17. 链接1

[43] Vaughn SF. Glucosinolates as natural pesticides. In: Cutler HG, Cutler SJ, editors. Biologically active natural products: agrochemicals. Boca Raton: CRC Press; 1999. p. 81–91. 链接1

[44] Dayan FE, Rimando AM, Pan Z, Baerson SR, Gimsing AL, Duke SO. Sorgoleone. Phytochemistry 2010;71(10):1032–9. 链接1

[45] Díaz-Tielas C, Graña E, Maffei ME, Reigosa MJ, Sánchez-Moreiras AM. Plasma membrane depolarization precedes photosynthesis damage and long-term leaf bleaching in (E)-chalcone-treated Arabidopsis shoots. J Plant Physiol 2017;218:56–65. 链接1

[46] Lydon J, Duke SO. Glyphosate induction of elevated levels of hydroxybenzoic acids in higher plants. J Agric Food Chem 1988;36(4):813–8. 链接1

[47] Reigosa MJ, Pazos-Malvido E. Phytotoxic effects of 21 plant secondary metabolites on Arabidopsis thialiana germination and root growth. J Chem Ecol 2007;33(7):1456–66. 链接1

[48] Feller U, Anders I, Mae T. Rubiscolytics: fate of Rubisco after its enzymatic function in a cell is terminated. J Exp Bot 2007;59(7):1615–24. 链接1

[49] Barbeau WE, Kinsella JE. Ribulose bisphosphate carboxylase/oxygenase (Rubisco) from green leaves-potential as a food protein. Food Rev Int 1988;4 (1):93–127. 链接1

[50] Berry JA, Lorimer GH, Pierce J, Seemann JR, Meek J, Freas S. Isolation, identification, and synthesis of 2-carboxyarabinitol 1-phosphate, a diurnal regulator of ribulose bisphosphate carboxylase activity. Proc Natl Acad Sci USA 1987;84(3):734–8. 链接1

[51] Usuda H, Edwards GE. Inhibition of photosynthetic carbon metabolism in isolated chloroplasts by iodoacetol phosphate. Plant Physiol 1981;67(4):854–8. 链接1

[52] Heap I, Duke SO. Overview of glyphosate-resistant weeds worldwide. Pest Manage Sci 2018;74(5):1040–9. 链接1

[53] Duke SO. Enhanced metabolic degradation: the last evolved glyphosate resistance mechanism of weeds? Plant Physiol 2019;181(4):1401–3. 链接1

[54] Gaines TA, Zhang W, Wang D, Bukun B, Chisholm ST, Shaner DL, et al. Gene amplification confers glyphosate resistance in Amaranthus palmeri. Proc Natl Acad Sci USA 2010;107(3):1029–34. 链接1

[55] Culpepper AS, Grey TL, Vencill WK, Kichler JM, Webster TM, Brown SM, et al. Glyphosate-resistant Palmer amaranth (Amaranthus palmeri) confirmed in Georgia. Weed Sci 2006;54(4):620–6. 链接1

[56] Wiersma AT, Gaines TA, Preston C, Hamilton JP, Giacomini D, Buell CR, et al. Gene amplification of 5-enol-pyruvylshikimate-3-phosphate synthase in glyphosate-resistant Kochia scoparia. Planta 2015;241(2):463–74. 链接1

[57] Malone JM, Morran S, Shirley N, Boutsalis P, Preston C. EPSPS gene amplification in glyphosate-resistant Bromus diandrus. Pest Manage Sci 2016;72(1):81–8. 链接1

[58] Chen J, Huang H, Zhang C, Wei S, Huang Z, Chen J, et al. Mutations and amplification of EPSP gene confer resistance to glyphosate in goosegrass (Eleusine indica). Planta 2015;242(4):859–68. 链接1

[59] Ngo TD, Malone JM, Boutsalis P, Gill G, Preston C. ESPS gene amplification conferring resistance to glyphosate in windmill grass (Chloris truncata) in Australia. Pest Manage Sci 2018;74(5):1101–8. 链接1

[60] Laforest M, Soufiane B, Simard MJ, Obeid K, Page E, Nurse RE. Acetyl-CoA carboxylase overexpression in herbicide-resistant large crabgrass (Digitaria sanguinalis). Pest Manage Sci 2017;73(11):2227–35. 链接1

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