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Genome-wide identification and expression analysis of the β-amylase genes strongly associated with fruit

Hongxia MIAO,Peiguang SUN,Yulu MIAO,Juhua LIU,Jianbin ZHANG,Caihong JIA,Jingyi WANG,Zhuo WANG,Zhiqiang JIN,Biyu XU

《农业科学与工程前沿(英文)》 2016年 第3卷 第4期   页码 346-356 doi: 10.15302/J-FASE-2016127

摘要: β-amylase (BAM) is an important enzyme involved in conversion of starch to maltose in multiple biological processes in plants. However, there is currently insufficient information on the BAM gene family in the important fruit crop banana. This study identified 16 genes in the banana genome. Phylogenetic analysis showed that MaBAMs were classified into four subfamilies. Most in each subfamily shared similar gene structures. Conserved motif analysis showed that all identified MaBAM proteins had the typical glyco hydro 14 domains. Comprehensive transcriptomic analysis of two banana genotypes revealed the expression patterns of in different tissues, at various stages of fruit development and ripening, and in responses to abiotic stresses. Most s showed strong transcript accumulation changes during fruit development and late-stage ripening. Some showed significant changes under cold, salt, and osmotic stresses. This finding indicated that might be involved in regulating fruit development, ripening, and responses to abiotic stress. Analysis of five hormone-related and seven stress-relevant elements in the promoters of further revealed that BAMs participated in various biological processes. This systemic analysis provides new insights into the transcriptional characteristics of the genes in banana and may serve as a basis for further functional studies of such genes.

关键词: β-amylase     banana     genome-wide identification     fruit development     abiotic stress    

Isolation, identification and primary application of bacteria from putrid alkaline silica sol

Lijie REN,Ye HAN,Shuwen YANG,Xiqian TAN,Jin WANG,Xin ZHAO,Jie FAN,Ting DONG,Zhijiang ZHOU

《化学科学与工程前沿(英文)》 2014年 第8卷 第3期   页码 330-339 doi: 10.1007/s11705-014-1419-9

摘要: The putrefaction of alkaline silica sol was investigated in this paper. The total colony numbers in three alkaline silica sol samples were 1.47×10 , 1.25×10 , and 9.45×10 cfu·mL , respectively. The salt- and alkali-tolerant strains were isolated and selected using nutrient agar medium at 2.5% salinity and pH 9.5. Basic morphological, physiological and biochemical tests were conducted to confirm the preliminary characterizations of the strains. Based on API 50 CH test and 16S rDNA gene sequence analysis, the isolated strains were finally identified as sp., sp., and . The survivability of the strains under different conditions such as salinities, acidities and temperatures was also studied. Some suitable methods for degerming, such as product pipe steam sterilization and regular canister cleaning, were proposed. To explore the possibility of isolates in industrial application, their alkaline protease and amylase production abilities were preliminarily studied. Five strains produced alkaline protease, whereas two strains produced alkaline amylase. Thus, understanding of the putrefaction on alkaline silica sol would be beneficial for improving industrial production.

关键词: putrid alkaline silica sol     alkaliphile     isolation and identification     sterilization     alkaline protease and alkaline amylase    

标题 作者 时间 类型 操作

Genome-wide identification and expression analysis of the β-amylase genes strongly associated with fruit

Hongxia MIAO,Peiguang SUN,Yulu MIAO,Juhua LIU,Jianbin ZHANG,Caihong JIA,Jingyi WANG,Zhuo WANG,Zhiqiang JIN,Biyu XU

期刊论文

Isolation, identification and primary application of bacteria from putrid alkaline silica sol

Lijie REN,Ye HAN,Shuwen YANG,Xiqian TAN,Jin WANG,Xin ZHAO,Jie FAN,Ting DONG,Zhijiang ZHOU

期刊论文