Research Crop Genetics and Breeding—Perspective

The Potential Role of Powdery Mildew-Resistance Gene Pm40 in Chinese Wheat-Breeding Programs in the Post-Pm21 Era

  • Shengwen Tang a ,
  • Yuting Hu a ,
  • Shengfu Zhong a ,
  • Peigao Luo , a,b
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  • a Sichuan Provincial Key Laboratory of Plant Breeding and Genetics, Sichuan Agricultural University, Chengdu 611130, China
  • b State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China

Received date: 08 Aug 2017

Revised date: 03 Dec 2017

Accepted date: 26 Jun 2018

Published date: 11 Sep 2018

Copyright

2018 THE AUTHORS

Abstract

Abstract

Powdery mildew, which is caused by Blumeria graminis f. sp. tritici (Bgt), is an important leaf disease that affects wheat yield. Powdery mildew-resistance (Pm) gene Pm21 was first transferred into wheat in the 1980s, by translocating the Heuchera villosa chromosome arm 6VS to the wheat chromosome arm 6AL (6VS·6AL). Recently, new Bgt isolates that are virulent to Pm21 have been identified in some wheat fields, indicating that wheat breeders should be aware of the risk of deploying Pm21, although pathological details regarding these virulent isolates still remain to be discovered. Pm40 was identified and mapped on the wheat chromosome arm 7BS from several wheat lines developed from the progenies of a wild cross between wheat and Thinopyrum intermedium. Pm40 offers a broad spectrum of resistance to Bgt, which suggests that it is likely to provide potentially durable resistance. Cytological methods did not detect any large alien chromosomal segment in the wheat lines carrying Pm40. Lines with Pm40 and promising agronomical traits have been released by several wheat-breeding programs in the past several years. Therefore, we believe that Pm40 will play a role in powdery mildew-resistance wheat breeding after Pm21 resistance is overcome by Bgt isolates. In addition, both Pm21 and Pm40 were derived from alien species, suggesting that the resistance genes derived from alien species are potentially more durable or effective than those identified from wheat.

Cite this article

Shengwen Tang , Yuting Hu , Shengfu Zhong , Peigao Luo . The Potential Role of Powdery Mildew-Resistance Gene Pm40 in Chinese Wheat-Breeding Programs in the Post-Pm21 Era[J]. Engineering, 2018 , 4(4) : 500 -506 . DOI: 10.1016/j.eng.2018.06.004

1. Introduction

Wheat powdery mildew, which is caused by Blumeria graminis f. sp. tritici (Bgt), is a destructive fungal disease around the world, and remains a significant threat to wheat (Triticum aestivum L. (T. aestivum L.)) production. In China, wheat powdery mildew has been widespread in most winter wheat-growing regions since the 1970s, and has caused severe yield losses [1]. In southwest China, although powdery mildew was second to stripe rust (caused by Puccinia striiformis f. sp. tritici(Pst)) in the past, it now surpasses stripe rust as the most destructive wheat leaf disease due to the deployment of semi-dwarf cultivars and the increased use of irrigation and nitrogenous fertilizers [24].
Chemical control and appropriate wheat-cultivation measures can reduce some of the yield losses caused by powdery mildew; however, growing new disease-resistant cultivars is the best strategy for controlling powdery mildew and will also reduce both the production cost and the environmental contamination from the application of fungicides [5]. Powdery mildew-resistance (Pm) genes are the prerequisite for developing resistant wheat cultivars; therefore, the identification of new Pm genes is an important ongoing task for breeders in order to improve wheat resistance to powdery mildew. To date, 91 Pm genes (Pm18 = Pm1c, Pm22 = Pm1e, Pm23 = Pm4c, Pm17 = Pm8, Pm31 = Pm21, and Pm48 = Pm46) [612] have been identified on 54 loci of wheat chromosomes (Table 1) [1,4,610,1278]. Pm genes have been assigned on almost all chromosomes except 3D and 4D. The number of loci on the B genome is up to 27 (50.0%) out of 54 loci, while the number of loci on the D genome is only 13 (24.1%) (Table 2). The number of Pm genes mapped on the A genome is up to 42 (46.2%), whereas only 17 (18.7%) Pm genes are mapped on the D genome. The mean number of Pm alleles per loci is 3.00, 1.19, and 1.31 in the A, B, and D genomes, respectively, which shows that each Pm locus in the A genome has more alleles than those in the B and D genome. Moreover, the data in Table 2 show that the alien Pm genes such as Pm21 and Pm40, usually displaying the board-spectrum and putatively durable resistance, were frequently transferred from wild relatives into A and B genome.
Table 1 Powdery mildew-resistance genes reported in wheat and their chromosomal distribution.
ChromosomeLocusGenes from T. aestivumGenes from alien species
1APm3, Pm25Pm3a [13], Pm3b [13], Pm3c [14], Pm3d [15], Pm3e [15], Pm3f [15], Pm3g [16], Pm3h [16], Pm3i [16], Pm3j [16], Pm3l [17], Pm3m [18], Pm3n [18], Pm3o [18], Pm3p [18], Pm3q [18], Pm3r [18]Pm3k (T. turgidum dicoccon) [17], (Secale cereale (S. cereale)) [19], Pm25 (T. boeoticum) [20]
2APm4, Pm50Pm4c (Pm23) [9], Pm50 [21]Pm4a (T. dicoccum) [14,22], Pm4b (T. carthlicum) [23,24], Pm4d (T. monococcum) [25]
3APm44Pm44 [26]
4APm16Pm16 (T. dicoccoides) [27]
5APm55Pm55 (5AL/5DL) (Dasypyrim villosa) [28]
6APm21, Pm56Pm21 (Pm31) (Haynaldia villosa) [29,30], Pm56 (S. cereale) [116]
7APm1, Pm9, Pm37, Pm59, Pm60Pm1a [31,32], Pm1c (Pm18) [7,33], Pm1e (Pm22) [8], Pm9 [34], Pm59 [117]Pm1b (T. monococcum) [7], Pm1d (Aegilops speltoides (Ae. speltoides)) [7], Pm37 (T. timopheevi) [35], Pm60 (T. urartu) [81]
1BPm8, Pm28, Pm32, Pm39Pm28 [36], Pm39 [37]Pm8 (Pm17) (S. cereale) [10], Pm32 (Ae. speltoides) [38]
2BPm6, Pm26, Pm33, Pm42, Pm49, Pm51, Pm52, Pm57Pm52 [1]Pm6 (T. timopheevi) [39,40], Pm26 (T. dicoccoides) [41], Pm33 (T. carthlicum) [42], Pm42 (T. turgidum dicoccon) [43], Pm49 (T. turgidum dicoccon) [44], Pm51 (Thinopyrum ponticum (Th. ponticum)) [45], Pm57 (Ae. searsii) [46]
3BPm13, Pm41Pm13 (Ae. longissima) [47], Pm41 (T. turgidum dicoccon) [48]
4BPm7Pm7 (S. cereale) [49,50]
5BPm30, Pm36, Pm53Pm30 (T. dicoccoides) [51], Pm36 (T. turgidum dicoccon) [52], Pm53 (Ae. speltoides) [53]
6BPm11, Pm12, Pm14, Pm20, Pm27, Pm54Pm11 [54], Pm14 [55], Pm54 [56]Pm12 (Ae. speltoides) [57], Pm20 (S. cereale) [49], Pm27 (T. timopheevii) [58]
7BPm5, Pm40, Pm47Pm5c [59], Pm5d [59,60], Pm5e [61], Pm47 [62]Pm5a (T. dicoccum) [63], Pm5b (T. dicoccum) [59], Pm40 (Th. intermedium) [4,64]
1DPm10, Pm24Pm10 [65], Pm24a [66,67], Pm24b [68]
2DPm43, Pm58Pm43 (Th. intermedium) [69], Pm58 (Ae. tauschii) [6]
5DPm2, Pm34, Pm35, Pm46Pm2c [70,71], Pm46 (Pm48) [12]Pm2a (Ae. tauschii) [72,73], Pm2b (Agropyron cristatum) [70], Pm34 (Ae. tauschii) [74], Pm35 (Ae. tauschii) [75]
6DPm45Pm45 [76]
7DPm15, Pm19, Pm29, Pm38Pm15 [55], Pm38 [77]Pm19 (Ae. squarrosa) [72,73], Pm29 (Ae. ovate) [78]
Table 2 The different distributions of formally named powdery mildew-resistance genes on wheat A, B, and D genomes.
GenomeNumber of lociNumber of Pm genes (genes from alien species)Proportion of alien genesMean number of alleles per average locus
A1442 (14)0.333.00
B2732 (22)0.691.19
D1317 (8)0.471.31

2. The contribution of alien Pm genes to the improvement of wheat resistance to powdery mildew

The transfer of desirable alien genes from wild relatives with durable resistance to a broad spectrum of pathogens into wheat is an important objective in modern breeding programs [79]. Within the 54 named Pm genes, 44 genes in 37 loci were derived from wild relatives or sparsely cultivated subspecies. These include T. boeoticum (Pm25) [20], T. monococcum (Pm1b and Pm4d) [7,25], T. dicoccoides (Pm16, Pm26, Pm30, and Pm31) [27,29,41,51], T. dicoccum (Pm4a, Pm5a, and Pm5b) [59,63,80], T. carthlicum (Pm4b and Pm33) [23], T. turgidum dicoccon (Pm3k, Pm36, Pm41, Pm42, and Pm49) [17,43,44,48,52], T. timopheevi (Pm6, Pm27, and Pm37) [35,39,58], T. urartu (Pm60) [81], A. cristatum (Pm2b) [70], Aegilops spp. (Pm1d, Pm2a, Pm12, Pm13, Pm19, Pm29, Pm32, Pm34, Pm35, Pm53, Pm57, and Pm58) [6,7,38,46,47,53,72,74,75,78,82], Haynaldia villosa (H. villosa, syn. Dasypyrum villosum) (Pm21 and Pm55) [28,30], Secale cereale (Pm7, Pm8, Pm17, Pm20, and Pm56) [10,19,49,83], and Thinopyrum spp. (Pm40, Pm43, and Pm51) [45,64,69]. Within the 44 Pm genes derived from alien species or sparsely cultivated subspecies, 22 are assigned on the B genome, while only 14 are assigned on the A genome, and eight on the D genome (Table 2). The proportion of alien Pm genes within the whole Pm genes is 0.69 on B genome, while 0.33 on A genome and 0.47 on D genome; this large number and proportion of alien genes on the B genome may explain its high tolerance to the presence of alien chromatin. Most of the published alien Pm genes have not been successfully used in breeding in the past; however, several alien Pm genes have played an important role in Chinese wheat breeding.

2.1. Alien Pm genes widely used in Chinese wheat breeding

Pm8, one of the best-known and most widely used genes in wheat breeding, has played a major role in protecting wheat yield loss from powdery mildew infection. Pm8 was transferred from the “Petkus” rye chromosome into hexaploid wheat in the early 1930s. Cytological analysis showed that the rye chromosome arm 1RS was translocated to the wheat chromosome arm 1BL, resulting in the translocation chromosome T1BL·1RS [84]. In addition to powdery mildew resistance, the rye chromosome arm 1RS offers resistance to other diseases such as strip rust (caused by Puccinia striiformis f. sp. tritici [85,86]) and possesses desirable agronomic traits that increase wheat yield [87]. Hence, Pm8, as a valuable powdery mildew-resistance gene, was widely used in wheat-breeding programs and produced many wheat cultivars with resistance to powdery mildew; these include “Kavkaz,” “Apollo,” “Disponent,” and “CN10,” which have been widely grown around the world [10,8892]. Although some newly emerged Bgt isolates overcame the resistance of Pm8 in the 1990s [93], the use of Pm8 in wheat-breeding programs continued, especially in the 21st century, because the wheat-rye 1BL·1RS translocated chromosome carrying Pm8 has other excellent agronomic traits such as wide adaptability, high yield potential, and delayed leaf senescence [87,94]. Thus, Pm8 has been effective against the powdery mildew pathogen for about 60 years and has played an important role in wheat resistance breeding around the world [95].
Another example of the successful use of an alien wheat powdery mildew-resistance gene is Pm21. In the early 1980s, H. villosa was identified as a potential source of powdery mildew resistance [96], and some alien addition lines and substitution lines developed from H. villosa showed resistance [97]. A resistance gene from H. villosa, designated as Pm21, was mapped on the wheat–H. villosa 6VS·6AL translocated chromosome [30]. The 6VS·6AL translocation lines carrying Pm21 have been widely used as a parent in Chinese wheat-breeding programs because the other resistance genes have been overcome by newly emerged isolates, and because the use of Pm21 has little adverse effect on other agronomic traits [98]. More than ten wheat cultivars carrying Pm21 have been released in China since 2002; these include Yangmai 5, Yangmai 15, Yangmai 18, Neimai 8, and Neimai 9 [30,99,100], which have been grown on more than 3.4 × 106 hm2), and this growth area is rapidly expanding, especially since 2007 [101]. Virulence testing revealed that Pm21 shows a broad spectrum of resistance, and remains highly effective against most of the isolates of Bgt [102]; this indicates that the resistance of Pm21 has lasted for more than 40 years. A few studies reported that new isolates of Bgt were virulent to Pm21 [103,104]; however, two recent studies demonstrated that Pm21 is still effective against 1082 Bgt isolates collected from eight major wheat-growing regions in China [105], and against 1402 Bgt isolates collected from 19 locations in Poland [106]. These results suggest that Pm21 can still be used as a pivotal powdery mildew-resistance gene in wheat-breeding programs in the future.

2.2. The great potential of Pm40 in wheat resistance breeding

In 2007, we identified two powdery mildew-resistant wheat lines, Yu24 and Yu25. These two wheat lines were derived from the cross between the wheat cultivar Chuanmai 107 and the octoploid Tritigrigia TAI7047, where the TAI7047 was derived from the cross between T. aestivum cv. Taiyuan 768/Th. intermedium//T. aestivum line 76(64). Genetic analysis suggested that the powdery mildew resistance was controlled by two pairs of Mendelian genes [107]. One of the genes, Pm40, was assigned to wheat chromosome arm 7BS by microsatellite markers [64].
Pm40 is highly effective and durable against many Bgt isolates. The powdery mildew resistance of both Yu24 and Yu25 was originally observed over several consecutive years in fields at the Ya’an Agricultural Research Station of Sichuan Agricultural University in southwest China, where the climate is warm and humid, with a yearly average temperature of 15–17 °C and an average annual precipitation of 1520 mm [64]. These weather conditions favor epidemics of wheat diseases, and there exists a large variation in the virulence of Bgt [4]. These observations suggest that Yu24 and Yu25 may be resistant to various Bgt isolates. In fact, the resistance conferred by Pm40 is still effective in fields located in the Chinese provinces of Henan, Shandong, Hebei, and Fujian [102]. A powdery mildew-resistance test in a greenhouse at the Institute of Crop Science, Chinese Academy of Agricultural Science, Beijing, demonstrated that the resistance in wheat line L658, conferred by Pm40, was resistant to all 28 of the Bgt isolates collected from various regions of China. This test displayed the board-spectrum and putatively durable character of Pm40 (Table 3 [5] and Fig. 1), suggesting that Pm40 holds great potential to be an important powdery mildew-resistance gene in wheat-breeding programs.
Table 3 Infection types on wheat seedlings inoculated with Bgt isolates from different areas.
IsolateSourceWheat line (gene)
Coker 747 (Pm6)Liangxing 99 (Pm52)L658 (Pm40)
Bgt68-2Beijing000
Bgt74-1Hebei300
Bgt87Beijing300
Bgt74-3Hebei300
Bgt86-3Jiangsu200
Bgt75-1Henan200
Bgt75-2Henan300
Bgt82-3Shandong000
Bgt88-3Shandong300
Bgt77-1Henan300
Bgt83-1Shandong000
Bgt81-2Shandong400
Bgt68-1Beijing100
Bgt69-1Hebei300
Bgt82-2Shandong000
Bgt78-3Henan200
Bgt79-2Shandong330
Bgt44-6Shandong330
Bgt76-3Henan300
Bgt78-2Henan300
Bgt68-3Beijing100
Bgt73-3Hebei100
Bgt72Hebei200
Bgt71-2Hebei200
Bgt44-4Shandong030
Bgt79-3Shandong230
Bgt75-3Henan320
Bgt28Sichuan0
Fig. 1 Powdery mildew responses on infected leaves of Pm40. (a) Wheat line L658 (Pm40) in the field; (b) infected leaves of the wheat lines L658 (resistant) and MY11 (susceptible) in the greenhouse 14 days after inoculation; (c) infected leaves of wheat lines L658 and MY11 in the field.

Full size|PPT slide

Pm40 can be quickly integrated into commercial wheat cultivars. Alien chromosomal translocation has been a common and useful bridge for transferring genes from wild relatives to common wheat. However, the “linkage drag” that transfers other linked genes for undesirable traits together with the target gene from the alien translocation is a major drawback to the use of these resistance sources in breeding [108]. The original wheat lines Yu24 and Yu25, which were derived from the wild cross between common wheat and Th. intermedium, showed good genetic stability of powdery mildew resistance along with uniform agronomic traits in the field [107,109]. In addition, Pm40 inherits as a normal Mendelian unit, and there are wheat-specific products in the resistant parent produced by polymerase chain reaction (PCR) amplifying. A wheat marker linked to Pm40 and the closely linked DNA marker loci flanking Pm40 show good agreement in loci order and flanking marker distances with the consensus genetic map [64]. No alien chromosomal segment is detected by in situ hybridization in any of the wheat lines carrying Pm40 [4,110]. The good stability of the powdery mildew resistance conferred by Pm40 ensures that it can be quickly integrated into commercial wheat cultivars by molecular breeding methods.
The wheat lines containing Pm40 usually have desirable agronomic traits and can easily be used in future Chinese wheat breeding. Breeders usually pay more attention to overall agronomic performance and to the effectiveness of resistance transferring than to where the resistance genes come from [4]. To accelerate the deployment of Pm40 in wheat-breeding programs, we have developed some Pm40 wheat lines, including L658 (PI 672537), L693 (PI 672538), L696 (PI 672539), and L699 (PI 672540). Many of these lines exhibit excellent agronomic traits such as good plant height, yield index, head weight, and thousand kernel weight. They also show resistance to multiple diseases [111]; for example, YrL693 confers resistance to stripe rust [112], while FhbL693a and FhbL693b confer resistance to Fusarium head blight (caused by Fusarium gramineum) [110]. Molecular markers closely linked with Pm40 have been identified. For example, we have identified two simple sequence repeats (SSRs) markers, Xwmc335 and Xgwm297, and two sequence-tagged site-based expression-sequence tags (EST-STS), BF291338 and BE446359. Both markers were less than one centimorgan to Pm40 [4,64], which thus provides a useful tool for breeders to effectively transfer Pm40 into commercial wheat cultivars using molecular marker-assistant selection. Finally, information on chlorophyll content, photosynthetic and chlorophyll fluorescence parameters, antioxidant activity, and gene expression after Bgt infection could be used as an additional reference for breeders in breeding practices [109]. Therefore, wheat lines containing Pm40 are promising for the improvement of both yield and multiple disease resistance; in addition, the availability of the closely linked marker paves the way for breeders to achieve an effective transfer of Pm40 into commercial wheat cultivars.

3. Deployment of powdery mildew-resistance wheat genes post-Pm21 in China

Several new isolates of Bgt have been reported to be virulent to Pm21 [103,104]. This indicates a forthcoming risk of powdery mildew epidemics in Chinese wheat production due to the loss of resistance of Pm21. Therefore, wheat breeders need to identify a replacement for Pm21 for powdery mildew-resistance improvement. Among the published Pm genes, Pm40 was derived from Th. intermedium and confers strong resistance to powdery mildew with a broad resistance spectrum [5]. In addition, wheat lines carrying Pm40 usually have good yield traits, plant type, and resistance to other diseases such as stripe rust and Fusarium head blight [111]. Moreover, the stability of Pm40 resistance and the molecular markers that are closely linked to Pm40 [4,64] make it a good candidate for the replacement of Pm21. To effectively use Pm40 in wheat breeding, we suggest that pyramiding of Pm40 as the major provider of resistance, along with the other Pm genes is an important strategy to control wheat powdery mildew.

4. Durability and effectiveness of alien resistance genes

A wheat–Th. intermedium introgression line was recently shown to have a broader spectrum of resistance against different Bgt isolates than the genes from wheat in popular resistant cultivars [3]. For stripe rust wheat resistance, several alien Yr genes, such as Yr5 derived from T. spelta album [113], Yr9 from rye [114], Yr15 from T. dicoccoides [115], and Yr26 from T. turgidum [116], have a broader spectrum of resistance against Pst than the Yr genes derived from common wheat. Although Yr9 has lost its resistance to Pst races CYR29, CYR31, CYR32, and CYR33 [90], it has played an important role in the improvement of wheat resistance to stripe rust. Yr26 is a major stripe rust-resistance gene that has been widely used in breeding and is still effective against current Pst races. Polymorphism at the loci that were derived from wide crossing contributes to parasite recognition, which will prevent loss of fitness due to disease; the more heterogeneous the host, the more incompatible it will be with pathogens [117]. Therefore, alien resistance genes usually provide a broader resistance spectrum and more potentially durable resistance than genes derived from crop itself. We assume that the larger variation in the DNA sequence of alien resistance genes, as compared with the genes from wheat, results in an increased resistance spectrum and in a delayed process of compatible reaction between the host and pathogens in alien genes. This hypothesis will provide new insight into selecting powdery mildew-resistance genes to be deployed in breeding programs in the future.

5. Conclusion

With its broad resistance spectrum, Pm40, as one of the important Pm genes derived from alien species or sporadically grown subspecies, could play a key role in the improvement of Chinese wheat resistance to powdery mildew. The potential of Pm40 has become even more important since the powdery mildew resistance conferred by Pm21 has been overcome by newly emerged Bgt isolates. In addition, further elucidation of the resistance mechanism of Pm40 would accelerate its application in wheat-breeding programs.

Acknowledgements

We are grateful to Dr. Hongjie Li of the Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, China, for providing many useful suggestions and for revising this manuscript. We are also grateful for financial support from the National Natural Science Foundation of China (31571661) and the Applied Basic Research Foundation of the Science and Technology Department of Sichuan Province of China (2017JY0012).

Compliance with ethics guidelines

Shengwen Tang, Yuting Hu, Shengfu Zhong, and Peigao Luo declare that they have no conflict of interest or financial conflicts to disclose.

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