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Multi-omics joint analysis revealed the metabolic profile of retroperitoneal liposarcoma
Frontiers of Medicine 2024, Volume 18, Issue 2, Pages 375-393 doi: 10.1007/s11684-023-1020-z
Keywords: RLPS proteomics metabolomics lipidomics metabolism
Sepsis biomarkers: an omics perspective
Xiao Liu, Hui Ren, Daizhi Peng
Frontiers of Medicine 2014, Volume 8, Issue 1, Pages 58-67 doi: 10.1007/s11684-014-0318-2
Keywords: sepsis biomarker genomics transcriptomics proteomics metabolomics
Discovery of emerging organic pollutants in the atmosphere through an omics approach
Frontiers of Environmental Science & Engineering 2023, Volume 17, Issue 4, doi: 10.1007/s11783-023-1645-9
● We review the framework of discovering emerging pollutants through an omics
Keywords: Air pollution Emerging pollutants Full-component High-resolution mass spectrometry Omics approach
Hudan Pan, Yanfang Zheng, Zhongqiu Liu, Zhongwen Yuan, Rutong Ren, Hua Zhou, Ying Xie, Liang Liu
Frontiers of Medicine 2019, Volume 13, Issue 5, Pages 564-574 doi: 10.1007/s11684-018-0676-2
Keywords: arthritis traditional Chinese medicine pharmacological mechanism metabolism adjuvant-induced arthritis omics
Frontiers of Medicine 2022, Volume 16, Issue 4, Pages 596-609 doi: 10.1007/s11684-021-0868-z
Keywords: innate immune checkpoint Siglec10 kidney renal clear cell carcinoma
Applying TCM Constitution Theory to Infertility via Omics
Qi Wang
Engineering 2023, Volume 30, Issue 11, Pages 30-31 doi: 10.1016/j.eng.2023.05.005
Frontiers of Medicine 2023, Volume 17, Issue 5, Pages 993-1005 doi: 10.1007/s11684-023-0989-7
Keywords: acupuncture migraine fMRI metabolome proteome
Frontiers of Environmental Science & Engineering 2023, Volume 17, Issue 4, doi: 10.1007/s11783-023-1650-z
● N2O emissions from a denitrifying SBR were 23 times higher than that of the CSTR.
Keywords: Denitrifying N2O mitigation SBR CSTR Meta-omics PHB
Technology and Equipment of Big Data on Crop Phenomics
Wen Weiliang , Guo Xinyu, Zhang Ying , Gu Shenghao, Zhao Chunjiang
Strategic Study of CAE 2023, Volume 25, Issue 4, Pages 227-238 doi: 10.15302/J-SSCAE-2023.04.015
Automatic equipment and information technologies make it possible to acquire multi-scale and multi-source heterogeneous data of crops under different growth conditions, forming big data on crop phenomics. This will greatly promote the research progress of crop functional genomics, digital breeding, and smart cultivation. In this paper, the demand for and industrial development of technology and equipment of big data on crop phenomics are analyzed. Then, the current situation of research and development in this area is summarized from five aspects: data acquisition hardware, data transmission, data analysis, knowledge formation, and applications. The problems and developmental trends of relevant technologies, equipment, and industrial application in China are analyzed from the perspectives of high-throughput acquisition and intelligent analysis of big data on crop phenomics. At last, the following suggestions are proposed: achieving breakthroughs regarding key crop phenotyping sensor technologies from the underlying chip level, forming an autonomous phenotyping extraction technology system on the basis of controllable open source, strengthening the standards system construction for big data on crop phenomics, creating a new model of genotype‒phenotype‒environment big data-driven digital breeding and smart cultivation, and building a talent pool and collaborative network for crop phenomics.
Keywords: crop phenomics phenotyping big data technology and equipment for phenotyping multi-omics
Hong LI,Ziding ZHANG
Frontiers of Agricultural Science and Engineering 2016, Volume 3, Issue 2, Pages 102-112 doi: 10.15302/J-FASE-2016100
Keywords: plant–pathogen interactions systems biology omics plant immunity protein–protein interaction network
Expanding the Scope of Multivariate Regression Approaches in Cross-Omics Research Article
Xiaoxi Hu, Yue Ma, Yakun Xu, Peiyao Zhao, Jun Wang
Engineering 2021, Volume 7, Issue 12, Pages 1725-1731 doi: 10.1016/j.eng.2020.05.028
Keywords: Multivariate regression methods Reduced rank regression Sparsity Dimensionality reduction Variable selection
Tao Rui,Xueyou Zhang,Shi Feng,Haitao Huang,Shaowei Zhan,Haiyang Xie,Lin Zhou,Shusen Zheng,Qi Ling,
Engineering 2022, Volume 16, Issue 9, Pages 162-175 doi: 10.1016/j.eng.2021.07.020
Keywords: Hepatocellular carcinoma miRNA cluster Exosome Multi-omics
The Application of Artificial Intelligence Accelerates G Protein-Coupled Receptor Ligand Discovery Review
Wei Chen,Chi Song,Liang Leng,Sanyin Zhang,Shilin Chen
Engineering 2024, Volume 32, Issue 1, Pages 18-28 doi: 10.1016/j.eng.2023.09.011
Keywords: G protein-coupled receptor Ligand Artificial intelligence Multi-omics Drug discovery
Multi-Omics-Guided Discovery of Omicsynins Produced by Streptomyces sp. 1647: Pseudo-Tetrapeptides Article
Hongmin Sun, Xingxing Li, Minghua Chen, Ming Zhong, Yihua Li, Kun Wang, Yu Du, Xin Zhen, Rongmei Gao, Yexiang Wu, Yuanyuan Shi, Liyan Yu, Yongsheng Che, Yuhuan Li, Jian-Dong Jiang, Bin Hong, Shuyi Si
Engineering 2022, Volume 16, Issue 9, Pages 176-186 doi: 10.1016/j.eng.2021.05.010
Keywords: Multi-omics Anti-influenza A virus Anti-coronavirus Streptomyces sp. 1647 Pseudo-tetrapeptides
Zihe Ding,Xiaoyue Wang,Yi Zhang,Jian Liu,Lei Wan,Tao Li,Lin Chen,Na Lin,Yanqiong Zhang,
Engineering doi: 10.1016/j.eng.2024.04.003
Keywords: tablets Rheumatoid arthritis Iron metabolism Clinical efficacy Drug-induced liver injury Clinical multi-omics
Title Author Date Type Operation
Multi-omics joint analysis revealed the metabolic profile of retroperitoneal liposarcoma
Journal Article
Discovery of emerging organic pollutants in the atmosphere through an omics approach
Journal Article
Deciphering the pharmacological mechanism of Guan-Jie-Kang in treating rat adjuvant-induced arthritis using omics
Hudan Pan, Yanfang Zheng, Zhongqiu Liu, Zhongwen Yuan, Rutong Ren, Hua Zhou, Ying Xie, Liang Liu
Journal Article
Innate immune checkpoint Siglec10 in cancers: mining of comprehensive omics data and validation in patient
Journal Article
mechanisms of acupuncture in the treatment of migraine based on functional magnetic resonance imaging and omics
Journal Article
Higher NO production in sequencing batch reactors compared to continuous stirred tank reactors: effect of feast-famine cycles
Journal Article
Technology and Equipment of Big Data on Crop Phenomics
Wen Weiliang , Guo Xinyu, Zhang Ying , Gu Shenghao, Zhao Chunjiang
Journal Article
Systems understanding of plant–pathogen interactions through genome-wide protein–protein interaction networks
Hong LI,Ziding ZHANG
Journal Article
Expanding the Scope of Multivariate Regression Approaches in Cross-Omics Research
Xiaoxi Hu, Yue Ma, Yakun Xu, Peiyao Zhao, Jun Wang
Journal Article
MiR-516a-3p is a Novel Mediator of Hepatocellular Carcinoma Oncogenic Activity and Cellular Metabolism
Tao Rui,Xueyou Zhang,Shi Feng,Haitao Huang,Shaowei Zhan,Haiyang Xie,Lin Zhou,Shusen Zheng,Qi Ling,
Journal Article
The Application of Artificial Intelligence Accelerates G Protein-Coupled Receptor Ligand Discovery
Wei Chen,Chi Song,Liang Leng,Sanyin Zhang,Shilin Chen
Journal Article
Multi-Omics-Guided Discovery of Omicsynins Produced by Streptomyces sp. 1647: Pseudo-Tetrapeptides
Hongmin Sun, Xingxing Li, Minghua Chen, Ming Zhong, Yihua Li, Kun Wang, Yu Du, Xin Zhen, Rongmei Gao, Yexiang Wu, Yuanyuan Shi, Liyan Yu, Yongsheng Che, Yuhuan Li, Jian-Dong Jiang, Bin Hong, Shuyi Si
Journal Article