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Multi-omics joint analysis revealed the metabolic profile of retroperitoneal liposarcoma
Frontiers of Medicine doi: 10.1007/s11684-023-1020-z
Keywords: RLPS proteomics metabolomics lipidomics metabolism
Technology and Equipment of Big Data on Crop Phenomics
Wen Weiliang , Guo Xinyu, Zhang Ying , Gu Shenghao, Zhao Chunjiang
Strategic Study of CAE 2023, Volume 25, Issue 4, Pages 227-238 doi: 10.15302/J-SSCAE-2023.04.015
Keywords: crop phenomics phenotyping big data technology and equipment for phenotyping multi-omics
The Application of Artificial Intelligence Accelerates G Protein-Coupled Receptor Ligand Discovery Review
Wei Chen,Chi Song,Liang Leng,Sanyin Zhang,Shilin Chen
Engineering 2024, Volume 32, Issue 1, Pages 19-29 doi: 10.1016/j.eng.2023.09.011
Keywords: G protein-coupled receptor Ligand Artificial intelligence Multi-omics Drug discovery
Tao Rui,Xueyou Zhang,Shi Feng,Haitao Huang,Shaowei Zhan,Haiyang Xie,Lin Zhou,Shusen Zheng,Qi Ling,
Engineering 2022, Volume 16, Issue 9, Pages 162-175 doi: 10.1016/j.eng.2021.07.020
Keywords: Hepatocellular carcinoma miRNA cluster Exosome Multi-omics
Multi-Omics-Guided Discovery of Omicsynins Produced by Streptomyces sp. 1647: Pseudo-Tetrapeptides Article
Hongmin Sun, Xingxing Li, Minghua Chen, Ming Zhong, Yihua Li, Kun Wang, Yu Du, Xin Zhen, Rongmei Gao, Yexiang Wu, Yuanyuan Shi, Liyan Yu, Yongsheng Che, Yuhuan Li, Jian-Dong Jiang, Bin Hong, Shuyi Si
Engineering 2022, Volume 16, Issue 9, Pages 176-186 doi: 10.1016/j.eng.2021.05.010
Keywords: Multi-omics Anti-influenza A virus Anti-coronavirus Streptomyces sp. 1647 Pseudo-tetrapeptides
Sepsis biomarkers: an omics perspective
Xiao Liu, Hui Ren, Daizhi Peng
Frontiers of Medicine 2014, Volume 8, Issue 1, Pages 58-67 doi: 10.1007/s11684-014-0318-2
Keywords: sepsis biomarker genomics transcriptomics proteomics metabolomics
Pei Han, Li-Sha Li, Zi-Xi Wang, Lin Xi, Hang Yu, Lin Cong, Zheng-Wei Zhang, Jie Fu, Ran Peng, Li-Bin Pan, Shu-Rong Ma, Xue-Yan Wang, Hong-Tian Wang, Xiang-Dong Wang, Yan Wang, Jin-Lyu Sun, Jian-Dong Jiang
Engineering 2022, Volume 15, Issue 8, Pages 115-125 doi: 10.1016/j.eng.2021.03.013
Due to the worldwide epidemic of allergic disease and a cure nowhere in sight, there is a crucial need to explore its pathophysiological mechanisms. As allergic disease has been associated with gut dysbiosis, we searched for a possible mechanism from the perspective of the molecular interface between host and microbiota with concurrent metabolomics and microbiome composition analysis. Sprague-Dawley rats were injected with Artemisia pollen extract to stimulate a hyper reaction to pollen. This hyper reaction decreased the circulation of valine, isoleucine, aspartate, glutamate, glutamine, indole-propionate (IPA), and myo-inositol, and reduced short-chain fatty acids (SCFAs) in feces. Several beneficial genera belonging to Ruminococcaceae, Lachnospiraceae, and Clostridiales declined in the model group, whereas Helicobacter and Akkermansia were only expressed in the model group. Furthermore, the expression of intestinal claudin-3 and liver fatty acid binding protein was downregulated in the model group and associated with metabolic changes and bacteria. Our results suggest that alterations in amino acids as well as their derivatives (especially valine, and IPA which is the reductive product of tryptophan) , SCFAs, and the gut microbiome (specifically Akkermansia and Helicobacter) may disrupt the intestinal barrier function by inhibiting the expression of claudin proteins and affecting the mucus layer, which further results in hay fever.
Keywords: Metabolome Gut microbiota Hay fever Allergic diseases Intestinal barrier dysfunction
Hudan Pan, Yanfang Zheng, Zhongqiu Liu, Zhongwen Yuan, Rutong Ren, Hua Zhou, Ying Xie, Liang Liu
Frontiers of Medicine 2019, Volume 13, Issue 5, Pages 564-574 doi: 10.1007/s11684-018-0676-2
Keywords: arthritis traditional Chinese medicine pharmacological mechanism metabolism adjuvant-induced arthritis omics
Frontiers of Medicine 2022, Volume 16, Issue 4, Pages 596-609 doi: 10.1007/s11684-021-0868-z
Keywords: innate immune checkpoint Siglec10 kidney renal clear cell carcinoma
Applying TCM Constitution Theory to Infertility via Omics
Qi Wang
Engineering 2023, Volume 30, Issue 11, Pages 30-31 doi: 10.1016/j.eng.2023.05.005
Hong LI,Ziding ZHANG
Frontiers of Agricultural Science and Engineering 2016, Volume 3, Issue 2, Pages 102-112 doi: 10.15302/J-FASE-2016100
Keywords: plant–pathogen interactions systems biology omics plant immunity protein–protein interaction network
Multi-objective optimization for the multi-mode finance-based project scheduling problem
Sameh Al-SHIHABI, Mohammad AlDURGAM
Frontiers of Engineering Management 2020, Volume 7, Issue 2, Pages 223-237 doi: 10.1007/s42524-020-0097-1
Keywords: multi-objective optimization finance-based scheduling multi-mode project scheduling mixed-integer linear
Frontiers of Mechanical Engineering 2023, Volume 18, Issue 2, doi: 10.1007/s11465-022-0737-8
Keywords: selective laser melting (SLM) build orientation determination multi-feature mechanical part (MFMP) fuzzy analytical hierarchy process multi-objective decision making (MODM)
Expanding the Scope of Multivariate Regression Approaches in Cross-Omics Research Article
Xiaoxi Hu, Yue Ma, Yakun Xu, Peiyao Zhao, Jun Wang
Engineering 2021, Volume 7, Issue 12, Pages 1725-1731 doi: 10.1016/j.eng.2020.05.028
Keywords: Multivariate regression methods Reduced rank regression Sparsity Dimensionality reduction Variable selection
Frontiers of Structural and Civil Engineering 2021, Volume 15, Issue 4, Pages 877-894 doi: 10.1007/s11709-021-0756-2
Keywords: bridges multi-lane factor traffic load lane load disparity multi-truck presence weigh-in-motion
Title Author Date Type Operation
Multi-omics joint analysis revealed the metabolic profile of retroperitoneal liposarcoma
Journal Article
Technology and Equipment of Big Data on Crop Phenomics
Wen Weiliang , Guo Xinyu, Zhang Ying , Gu Shenghao, Zhao Chunjiang
Journal Article
The Application of Artificial Intelligence Accelerates G Protein-Coupled Receptor Ligand Discovery
Wei Chen,Chi Song,Liang Leng,Sanyin Zhang,Shilin Chen
Journal Article
MiR-516a-3p is a Novel Mediator of Hepatocellular Carcinoma Oncogenic Activity and Cellular Metabolism
Tao Rui,Xueyou Zhang,Shi Feng,Haitao Huang,Shaowei Zhan,Haiyang Xie,Lin Zhou,Shusen Zheng,Qi Ling,
Journal Article
Multi-Omics-Guided Discovery of Omicsynins Produced by Streptomyces sp. 1647: Pseudo-Tetrapeptides
Hongmin Sun, Xingxing Li, Minghua Chen, Ming Zhong, Yihua Li, Kun Wang, Yu Du, Xin Zhen, Rongmei Gao, Yexiang Wu, Yuanyuan Shi, Liyan Yu, Yongsheng Che, Yuhuan Li, Jian-Dong Jiang, Bin Hong, Shuyi Si
Journal Article
Multi-Omics Analysis Provides Insight into the Possible Molecular Mechanism of Hay Fever Based on Gut
Pei Han, Li-Sha Li, Zi-Xi Wang, Lin Xi, Hang Yu, Lin Cong, Zheng-Wei Zhang, Jie Fu, Ran Peng, Li-Bin Pan, Shu-Rong Ma, Xue-Yan Wang, Hong-Tian Wang, Xiang-Dong Wang, Yan Wang, Jin-Lyu Sun, Jian-Dong Jiang
Journal Article
Deciphering the pharmacological mechanism of Guan-Jie-Kang in treating rat adjuvant-induced arthritis using omics
Hudan Pan, Yanfang Zheng, Zhongqiu Liu, Zhongwen Yuan, Rutong Ren, Hua Zhou, Ying Xie, Liang Liu
Journal Article
Innate immune checkpoint Siglec10 in cancers: mining of comprehensive omics data and validation in patient
Journal Article
Systems understanding of plant–pathogen interactions through genome-wide protein–protein interaction networks
Hong LI,Ziding ZHANG
Journal Article
Multi-objective optimization for the multi-mode finance-based project scheduling problem
Sameh Al-SHIHABI, Mohammad AlDURGAM
Journal Article
Build orientation determination of multi-feature mechanical parts in selective laser melting via multi-objective
Journal Article
Expanding the Scope of Multivariate Regression Approaches in Cross-Omics Research
Xiaoxi Hu, Yue Ma, Yakun Xu, Peiyao Zhao, Jun Wang
Journal Article