2023-07-31 , Volume 26 Issue 7

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    Life requires more than nucleic acids and proteins; sweet sugar molecules could be another life code beyond the central dogma of molecular biology. Does a yet-to-be-discovered paracentral dogma exist? This special issue focuses on sugars/glycans, the third alphabet of life, and their roles and applications in glycomedicine.  

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    Editorial
  • The Glycome and Glycomedicine
    [Author(id=1162119812241482359, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857668590461276, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119812518306431, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857668590461276, authorId=1162119812241482359, language=EN, stringName=Wei Wang, firstName=Wei, middleName=null, lastName=Wang, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, b, c, d, address=a The First Affiliated Hospital of Shantou University Medical College, Shantou 515041, China
    b School of Public Health, Shandong First Medical University & Shandong Academy of Medical Sciences, Tai’an 271016, China
    c Beijing Municipal Key Laboratory of Clinical Epidemiology, School of Public Health, Capital Medical University, Beijing 100069, China
    d Centre for Precision Health, Edith Cowan University, Perth, WA 6027, Australia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119812639941251, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857668590461276, orderNo=1, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119812879016592, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857668590461276, authorId=1162119812639941251, language=EN, stringName=Baofeng Yang, firstName=Baofeng, middleName=null, lastName=Yang, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=e, f, g, address=e Department of Pharmacology & State–Province Key Laboratories of Biomedicine-Pharmaceutics of China & Key Laboratory of Cardiovascular Medicine Research, Ministry of Education of the People’s Republic of China, College of Pharmacy, Harbin Medical University, Harbin 150081, China
    f Research Unit of Noninfectious Chronic Diseases in Frigid Zones, Chinese Academy of Medical Sciences, Harbin 150081, China
    g Northern Translational Medicine Research and Cooperation Center, Heilongjiang Academy of Medical Sciences, Harbin Medical University, Harbin 150081, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Wei Wang , Baofeng Yang

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • News & Highlights
  • Most Efficient Reaction Bolsters Prospects for Low-Carbon Ammonia
    [Author(id=1162119831799521368, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858051278758846, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119831946322016, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858051278758846, authorId=1162119831799521368, language=EN, stringName=Mitch Leslie, firstName=Mitch, middleName=null, lastName=Leslie, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=, address=null, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)] Mitch Leslie

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Fully Self-driving Future Hits the Brakes
    [Author(id=1162119832348975210, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858050783830973, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119832550301809, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858050783830973, authorId=1162119832348975210, language=EN, stringName=Chris Palmer, firstName=Chris, middleName=null, lastName=Palmer, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=, address= Senior Technology Writer, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)] Chris Palmer

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Advancing Genomic Science Opens Windows to the Past
    [Author(id=1162119832021819491, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858054428681151, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119832185397350, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858054428681151, authorId=1162119832021819491, language=EN, stringName=Sarah C.P. Williams, firstName=Sarah C.P., middleName=null, lastName=Williams, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=, address= Senior Technology Writer, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)] Sarah C.P. Williams

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Views & Comments
  • Glycomedicine: The Current State of the Art
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    b Beijing Municipal Key Laboratory of Clinical Epidemiology, School of Public Health, Capital Medical University, Beijing 100069, China
    c School of Public Health, Shandong First Medical University & Shandong Academy of Medical Sciences, Tai'an 271016, China
    d The First Affiliated Hospital of Shantou University Medical College, Shantou 515041, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Wei Wang

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Extending the “Paracentral Dogma” of Biology with the Metabolome: Implications for Understanding Genomic–Glycomic–Metabolic–Epigenomic Synchronization
    [Author(id=1162119403779186748, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850037553455681, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119403934375999, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850037553455681, authorId=1162119403779186748, language=EN, stringName=Albert Stuart Reece, firstName=Albert Stuart, middleName=null, lastName=Reece, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=, address= Division of Psychiatry, University of Western Australia, Crawley, WA 6009, Australia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)] Albert Stuart Reece

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Research
  • Review
    Twelve Years of Genome-Wide Association Studies of Human Protein N-Glycosylation
    [Author(id=1162119813315224234, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857695001993584, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119813487190707, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857695001993584, authorId=1162119813315224234, language=EN, stringName=Anna Timoshchuk, firstName=Anna, middleName=null, lastName=Timoshchuk, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow 119991, Russia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119813621408443, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857695001993584, orderNo=1, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119813793374913, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857695001993584, authorId=1162119813621408443, language=EN, stringName=Sodbo Sharapov, firstName=Sodbo, middleName=null, lastName=Sharapov, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow 119991, Russia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119813919204042, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857695001993584, orderNo=2, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119814133113558, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857695001993584, authorId=1162119813919204042, language=EN, stringName=Yurii S. Aulchenko, firstName=Yurii S., middleName=null, lastName=Aulchenko, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, b, address=a MSU Institute for Artificial Intelligence, Lomonosov Moscow State University, Moscow 119991, Russia
    b Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Anna Timoshchuk , Sodbo Sharapov , Yurii S. Aulchenko

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Profound Diversity of the N-Glycome from Microdissected Regions of Colorectal Cancer, Stroma, and Normal Colon Mucosa
    [Author(id=1162119862040453918, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=1, authorType=1, ext={EN=AuthorExt(id=1162119862208226089, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, authorId=1162119862040453918, language=EN, stringName=Di Wang, firstName=Di, middleName=null, lastName=Wang, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, *, address=a Center for Proteomics and Metabolomics, Leiden University Medical Center,  Leiden 2300 RC, the Netherlands, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119862329860910, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, orderNo=1, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=1, authorType=1, ext={EN=AuthorExt(id=1162119862531187512, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, authorId=1162119862329860910, language=EN, stringName=Katarina Madunić, firstName=Katarina, middleName=null, lastName=Madunić, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, b, *, address=a Center for Proteomics and Metabolomics, Leiden University Medical Center,  Leiden 2300 RC, the Netherlands
     b Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen 2200, Denmark, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119862652822336, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, orderNo=2, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119862812205898, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, authorId=1162119862652822336, language=EN, stringName=Tao Zhang, firstName=Tao, middleName=null, lastName=Zhang, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Center for Proteomics and Metabolomics, Leiden University Medical Center,  Leiden 2300 RC, the Netherlands, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119862942229327, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, orderNo=3, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119863101612887, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, authorId=1162119862942229327, language=EN, stringName=Guinevere SM Lageveen-Kammeijer, firstName=Guinevere SM, middleName=null, lastName=Lageveen-Kammeijer, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Center for Proteomics and Metabolomics, Leiden University Medical Center,  Leiden 2300 RC, the Netherlands, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119863223247710, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, orderNo=4, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119863382631268, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858304425976004, authorId=1162119863223247710, language=EN, stringName=Manfred Wuhrer, firstName=Manfred, middleName=null, lastName=Wuhrer, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Center for Proteomics and Metabolomics, Leiden University Medical Center,  Leiden 2300 RC, the Netherlands, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Di Wang , Katarina Madunić , Tao Zhang , Guinevere SM Lageveen-Kammeijer , Manfred Wuhrer

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    High-Throughput Profiling of Serological Immunoglobulin G N-Glycome as a Noninvasive Biomarker of Gastrointestinal Cancers
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journalId=1155139928190095384, articleId=1159858326643204327, authorId=1162119868046696517, language=EN, stringName=Xiaoyu Zhang, firstName=Xiaoyu, middleName=null, lastName=Zhang, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=e, address=e Beijing Sanbo Brain Hospital, Capital Medical University, Beijing 100093, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119868344492109, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858326643204327, orderNo=10, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119868516458578, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858326643204327, authorId=1162119868344492109, language=EN, stringName=Lixing Ma f, firstName=Lixing Ma, middleName=null, lastName=f, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=f, address=f Department of Gastroenterology, The Second Affiliated Hospital of Shandong First Medical University, Taian 271000, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119868642287702, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858326643204327, orderNo=11, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119868856197213, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858326643204327, authorId=1162119868642287702, language=EN, stringName=Haifeng Hou, firstName=Haifeng, middleName=null, lastName=Hou, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=f, g, address=f Department of Gastroenterology, The Second Affiliated Hospital of Shandong First Medical University, Taian 271000, China
    g Department of Epidemiology, School of Public Health, Shandong First Medical University & Shandong Academy of Medical Sciences, Jinan 250117, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Pengcheng Liu , Xiaobing Wang , Aishe Dun , Yutong Li , Houqiang Li , Lu Wang , Yichun Zhang , Cancan Li , Jinxia Zhang , Xiaoyu Zhang , Lixing Ma f , Haifeng Hou

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Differences in Immunoglobulin G Glycosylation Between Influenza and COVID-19 Patients
    [Author(id=1162119539871768794, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=1, authorType=1, ext={EN=AuthorExt(id=1162119540031152349, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119539871768794, language=EN, stringName=Marina Kljaković-Gašpić Batinjan, firstName=Marina Kljaković-Gašpić, middleName=null, lastName=Batinjan, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, *, address=a University Hospital Centre Zagreb, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119540156981471, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=1, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=1, authorType=1, ext={EN=AuthorExt(id=1162119540324753633, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119540156981471, language=EN, stringName=Tea Petrović, firstName=Tea, middleName=null, lastName=Petrović, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, *, address=b Genos Glycoscience Research Laboratory, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119540446388452, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=2, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119540593189099, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119540446388452, language=EN, stringName=Frano Vučković, firstName=Frano, middleName=null, lastName=Vučković, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, address=b Genos Glycoscience Research Laboratory, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119540714823920, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=3, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119540899373304, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119540714823920, language=EN, stringName=Irzal Hadžibegović, firstName=Irzal, middleName=null, lastName=Hadžibegović, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=c, d, address=c Department of Cardiology, University Hospital Dubrava, Zagreb 10000, Croatia
    d Faculty of Dental Medicine and Health, Josip Juraj Strossmayer University, Osijek 31000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119541016813821, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=4, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119541163614467, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119541016813821, language=EN, stringName=Barbara Radovani, firstName=Barbara, middleName=null, lastName=Radovani, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=e, address=e Department of Biotechnology, University of Rijeka, Rijeka 51000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119541276860681, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=5, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119541423661327, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119541276860681, language=EN, stringName=Ivana Jurin, firstName=Ivana, middleName=null, lastName=Jurin, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=c, address=c Department of Cardiology, University Hospital Dubrava, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119541541101843, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=6, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119541687902489, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119541541101843, language=EN, stringName=Lovorka Đerek, firstName=Lovorka, middleName=null, lastName=Đerek, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=f, address=f Department for Laboratory Diagnostics, University Hospital Dubrava, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119541805343009, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=7, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119541952143653, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119541805343009, language=EN, stringName=Eva Huljev, firstName=Eva, middleName=null, lastName=Huljev, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=g, address=g Department for Acute Respiratory Infections, University Hospital for Infectious Diseases “Dr. Fran Mihaljević”, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119542065389868, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=8, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119542287687988, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119542065389868, language=EN, stringName=Alemka Markotić, firstName=Alemka, middleName=null, lastName=Markotić, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=h, i, j, address=h Department for Urogenital Infections, University Hospital for Infectious Diseases “Dr. Fran Mihaljević”, Zagreb 10000, Croatia
    i Department for Infectious Diseases, School of Medicine, Catholic University of Croatia, 10000 Zagreb, Croatia
    j Postdoctoral Study, Faculty of Medicine, University of Rijeka, Rijeka 51000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119542409322808, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=9, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119542572900669, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119542409322808, language=EN, stringName=Ivica Lukšić, firstName=Ivica, middleName=null, lastName=Lukšić, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=k, address=k Department of Maxillofacial Surgery, University of Zagreb School of Medicine, Dubrava University Hospital, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119542694535490, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=10, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119542858113351, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119542694535490, language=EN, stringName=Irena Trbojević-Akmačić, firstName=Irena, middleName=null, lastName=Trbojević-Akmačić, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, address=b Genos Glycoscience Research Laboratory, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119542979748171, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=11, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119543185269074, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119542979748171, language=EN, stringName=Gordan Lauc, firstName=Gordan, middleName=null, lastName=Lauc, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, l, address=b Genos Glycoscience Research Laboratory, Zagreb 10000, Croatia
    l Faculty of Pharmacy and Biochemistry, University of Zagreb, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119543306903894, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=12, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119543508230492, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119543306903894, language=EN, stringName=Ivan Gudelj, firstName=Ivan, middleName=null, lastName=Gudelj, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, e, address=b Genos Glycoscience Research Laboratory, Zagreb 10000, Croatia
    e Department of Biotechnology, University of Rijeka, Rijeka 51000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119543634059615, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, orderNo=13, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119543835386215, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159852578764808468, authorId=1162119543634059615, language=EN, stringName=Rok Čivljak, firstName=Rok, middleName=null, lastName=Čivljak, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=g, m, address=g Department for Acute Respiratory Infections, University Hospital for Infectious Diseases “Dr. Fran Mihaljević”, Zagreb 10000, Croatia
    m Department of Infectious Diseases, University of Zagreb School of Medicine, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Marina Kljaković-Gašpić Batinjan , Tea Petrović , Frano Vučković , Irzal Hadžibegović , Barbara Radovani , Ivana Jurin , Lovorka Đerek , Eva Huljev , Alemka Markotić , Ivica Lukšić , Irena Trbojević-Akmačić , Gordan Lauc , Ivan Gudelj , Rok Čivljak

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Serum IgG Glycan Hallmarks of Systemic Lupus Erythematosus
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    b Guangdong–Hong Kong–Macau Joint Lab on Chinese Medicine and Immune Disease Research, Guangzhou University of Chinese Medicine, Guangzhou 510000, China
    e State Key Laboratory of Quality Research in Chinese Medicine & Macau Institute for Applied Research in Medicine and Health, Macau University of Science and Technology, Macau 999078, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Hudan Pan , Jingrong Wang , Yong Liang , Canjian Wang , Ruimin Tian , Hua Ye , Xiao Zhang , Yuanhao Wu , Miao Shao , Ruijun Zhang , Yao Xiao , Zhi Li , Guangfeng Zhang , Hua Zhou , Yilin Wang , Xiaoshuang Wang , Zhanguo Li , Wei Liu , Liang Liu

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    IgG N-Glycosylation Cardiovascular Age Tracks Cardiovascular Risk Beyond Calendar Age
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authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, address=b Beijing Municipal Key Laboratory of Clinical Epidemiology, School of Public Health, Capital Medical University, Beijing 100069, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119816968463239, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857720570470832, orderNo=11, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119817148818322, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159857720570470832, authorId=1162119816968463239, language=EN, stringName=Wei Wang, firstName=Wei, middleName=null, lastName=Wang, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, 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    b Beijing Municipal Key Laboratory of Clinical Epidemiology, School of Public Health, Capital Medical University, Beijing 100069, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Zhiyuan Wu , Zheng Guo , Yulu Zheng , Yutao Wang , Haiping Zhang , Huiying Pan , Zhiwei Li , Lois Balmer , Xia Li , Lixin Tao , Xiuhua Guo , Wei Wang

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Periodic Changes in the N-Glycosylation of Immunoglobulin G During the Menstrual Cycle
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    d Centre for Precision Health, Edith Cowan University, Perth, WA 6027, Australia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119867979587650, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, orderNo=10, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119868126388295, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, authorId=1162119867979587650, language=EN, stringName=Qiaoyun Chu, firstName=Qiaoyun, middleName=null, lastName=Chu, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=e, address=e School of Basic Medical Sciences, Capital Medical University, Beijing 100054, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119868239634506, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, orderNo=11, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119868386435150, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, authorId=1162119868239634506, language=EN, stringName=Marija Pezer, firstName=Marija, middleName=null, lastName=Pezer, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Genos Glycoscience Research Laboratory, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119868499681361, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, orderNo=12, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119868680036439, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, authorId=1162119868499681361, language=EN, stringName=Wei Wang, firstName=Wei, middleName=null, lastName=Wang, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=c, d, address=c Beijing Municipal Key Laboratory of Clinical Epidemiology, School of Public Health, Capital Medical University, Beijing 100054, China
    d Centre for Precision Health, Edith Cowan University, Perth, WA 6027, Australia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119868793282651, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, orderNo=13, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119868973637727, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858311958945994, authorId=1162119868793282651, language=EN, stringName=Gordan Lauc, firstName=Gordan, middleName=null, lastName=Lauc, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, f, address=a Genos Glycoscience Research Laboratory, Zagreb 10000, Croatia
    f Department of Biochemistry and Molecular Biology, Faculty of Pharmacy and Biochemistry at University of Zagreb, Zagreb 10000, Croatia, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Julija Jurić , Hongli Peng , Manshu Song , Frano Vučković , Jelena Šimunović , Irena Trbojević-Akmačić , Youxin Wang , Jiaonan Liu , Qing Gao , Hao Wang , Qiaoyun Chu , Marija Pezer , Wei Wang , Gordan Lauc

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Human Prostate-Specific Antigen Carries N-Glycans with Ketodeoxynononic Acid
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    b Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen DK-2200, Denmark, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119836409061534, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858060648833991, orderNo=5, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119836601999523, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858060648833991, authorId=1162119836409061534, language=EN, stringName=Theo M. de Reijke, firstName=Theo, middleName=null, lastName=M. de Reijke, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=c, address=c Department of Urology, Amsterdam University Medical Centers, Location AMC, University of Amsterdam, Amsterdam 1105 AZ, the Netherlands, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119836727828647, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858060648833991, orderNo=6, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119836887212202, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858060648833991, authorId=1162119836727828647, language=EN, stringName=Manfred Wuhrer, firstName=Manfred, middleName=null, lastName=Wuhrer, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden 2333 ZA, the Netherlands, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119837000458414, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858060648833991, orderNo=7, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119837185007793, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858060648833991, authorId=1162119837000458414, language=EN, stringName=Guinevere S.M. Lageveen-Kammeijer, firstName=Guinevere, middleName=null, lastName=S.M. Lageveen-Kammeijer, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, d, address=a Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden 2333 ZA, the Netherlands
    d Analytical Biochemistry, Groningen Research Institute of Pharmacy, Faculty of Science and Engineering, University of Groningen, Groningen 9747 AG, the Netherlands, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Wei Wang , Tao Zhang , Jan Nouta , Peter A. van Veelen , Noortje de Haan , Theo M. de Reijke , Manfred Wuhrer , Guinevere S.M. Lageveen-Kammeijer

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Removable Dyes—The Missing Link for In-Depth N-Glycan Analysis via Multi-Method Approaches
    [Author(id=1162119863789478762, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119863990805360, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, authorId=1162119863789478762, language=EN, stringName=Samanta Cajic, firstName=Samanta, middleName=null, lastName=Cajic, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, b, address=a Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg 39106, Germany
    b glyXera GmbH, Magdeburg 39120, Germany, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119864112440182, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, orderNo=1, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119864313766782, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, authorId=1162119864112440182, language=EN, stringName=René Hennig, firstName=René, middleName=null, lastName=Hennig, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, b, address=a Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg 39106, Germany
    b glyXera GmbH, Magdeburg 39120, Germany, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119864439595910, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, orderNo=2, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119864603173776, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, authorId=1162119864439595910, language=EN, stringName=Valerian Grote, firstName=Valerian, middleName=null, lastName=Grote, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg 39106, Germany, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119864724808604, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, orderNo=3, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119864926135213, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, authorId=1162119864724808604, language=EN, stringName=Udo Reichl, firstName=Udo, middleName=null, lastName=Reichl, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, c, address=a Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg 39106, Germany
    c Otto-von-Guericke University, Chair of Bioprocess Engineering, Magdeburg 39106, Germany, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119865047770041, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, orderNo=4, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119865249096647, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858075781882844, authorId=1162119865047770041, language=EN, stringName=Erdmann Rapp, firstName=Erdmann, middleName=null, lastName=Rapp, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, b, address=a Max Planck Institute for Dynamics of Complex Technical Systems, Magdeburg 39106, Germany
    b glyXera GmbH, Magdeburg 39120, Germany, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Samanta Cajic , René Hennig , Valerian Grote , Udo Reichl , Erdmann Rapp

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Serum N-Glycan Markers for Diagnosing Significant Liver Fibrosis and Cirrhosis in Chronic Hepatitis B Patients with Normal Alanine Aminotransferase Levels
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Diseases, School of Basic Medical Sciences, Peking University Health Science Center, Beijing 100191, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)] Lin Wang , Yiqi Liu , Qixin Gu , Chi Zhang , Lei Xu , Lei Wang , Cuiying Chen , Xueen Liu , Hong Zhao , Hui Zhuang

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Feature Article
    A Chinese–French Study on Nuclear Energy and the Environment
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    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Performance of a Hierarchically Nanostructured W–Cu Composite Produced via Mediating Phase Separation
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ext={EN=AuthorExt(id=1162119867002314782, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858351712559389, authorId=1162119866842931222, language=EN, stringName=Xiaoyan Song, firstName=Xiaoyan, middleName=null, lastName=Song, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Key Laboratory of Advanced Functional Materials, Ministry of Education, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119867111366690, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858351712559389, orderNo=8, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119867258167338, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159858351712559389, authorId=1162119867111366690, language=EN, stringName=Zuoren Nie, firstName=Zuoren, middleName=null, lastName=Nie, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a Key Laboratory of Advanced Functional Materials, Ministry of Education, Faculty of Materials and Manufacturing, Beijing University of Technology, Beijing 100124, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)] Chao Hou , Hao Lu , Zhi Zhao , Xintao Huang , Tielong Han , Junhua Luan , Zengbao Jiao , Xiaoyan Song , Zuoren Nie

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Review
    A Review of Recent Developments in “On-Chip” Embedded Cooling Technologies for Heterogeneous Integrated Applications
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    b Office of the V.P. for Research, Binghamton University, Binghamton, NY 13902, USA, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)]
    Srikanth Rangarajan , Scott Schiffres , Bahgat Sammakia

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    A GIS Open-Data Co-Simulation Platform for Photovoltaic Integration in Residential Urban Areas
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    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    Occurrence and Decay of SARS-CoV-2 in Community Sewage Drainage Systems
    [Author(id=1162119437639803789, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850618321953251, orderNo=0, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=1, authorType=1, ext={EN=AuthorExt(id=1162119437790798743, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850618321953251, authorId=1162119437639803789, language=EN, stringName=Qian Dong, firstName=Qian, middleName=null, lastName=Dong, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, *, address=a State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119437908239264, 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stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119438612882389, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850618321953251, authorId=1162119438449304520, language=EN, stringName=Hai-Bo Ling, firstName=Hai-Bo, middleName=null, lastName=Ling, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, address=b Hubei Provincial Academy of Eco-Environmental Sciences, Wuhan 430072, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119438730322908, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850618321953251, orderNo=4, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, 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Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119440340934728, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850618321953251, orderNo=10, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119440538067028, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159850618321953251, authorId=1162119440340934728, language=EN, stringName=Jiu-Hui Qu, firstName=Jiu-Hui, middleName=null, lastName=Qu, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, c, address=a State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
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    Qian Dong , Jun-Xiong Cai , Yan-Chen Liu , Hai-Bo Ling , Qi Wang , Luo-Jing Xiang , Shao-Lin Yang , Zheng-Sheng Lu , Yi Liu , Xia Huang , Jiu-Hui Qu

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.

  • Article
    One-Step Synthesis of Structurally Stable CO2-Philic Membranes with Ultra-High PEO Loading for Enhanced Carbon Capture
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Technology, Harbin 150001, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119464474960605, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159851034514351092, orderNo=3, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119464634344172, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159851034514351092, authorId=1162119464474960605, language=EN, stringName=Songwei Li, firstName=Songwei, middleName=null, lastName=Li, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=b, address=b Key Laboratory of Materials Processing and Mold (Zhengzhou University), Ministry of Education, National Engineering Research Center for Advanced Polymer Processing Technology Department of Chemical Engineering, Zhengzhou University, Zhengzhou 450002, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null), Author(id=1162119464747590391, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159851034514351092, orderNo=4, firstName=null, middleName=null, lastName=null, nameCn=null, orcid=null, stid=null, country=null, authorPic=null, dead=0, email=null, emailSecond=null, emailThird=null, correspondingAuthor=0, authorType=1, ext={EN=AuthorExt(id=1162119464898585350, tenantId=1045748351789510663, journalId=1155139928190095384, articleId=1159851034514351092, authorId=1162119464747590391, language=EN, stringName=Lu Shao, firstName=Lu, middleName=null, lastName=Shao, prefix=null, suffix=null, authorComment=null, nameInitials=null, affiliation=null, department=null, xref=a, address=a MIIT Key Laboratory of Critical Materials Technology for New Energy Conversion and Storage, State Key Laboratory of Urban Water Resource and Environment, School of Chemistry and Chemical, Harbin Institute of Technology, Harbin 150001, China, bio=null, bioImg=null, bioContent=null, aboutCorrespAuthor=null)}, companyList=null)] Bin Zhu , Shanshan He , Yadong Wu , Songwei Li , Lu Shao

    Nowadays, there has been a growing trend in the field of high-energy physics (HEP), in both its experimental and phenomenological studies, to incorporate machine learning (ML) and its specialized branch, deep learning (DL). This review paper provides a thorough illustration of these applications using different ML and DL approaches. The first part of the paper examines the basics of various particle physics types and establishes guidelines for assessing particle physics alongside the available learning models. Next, a detailed classification is provided for representing Jets that are reconstructed in high-energy collisions, mainly in proton-proton collisions at well-defined beam energies. This section covers various datasets, preprocessing techniques, and feature extraction and selection methods. The presented techniques can be applied to future hadron−hadron colliders (HHC), such as the high-luminosity LHC (HL-LHC) and the future circular collider−hadron−hadron (FCC-hh). The authors then explore several AI techniques analyses designed specifically for both image and point-cloud (PC) data in HEP. Additionally, a closer look is taken at the classification associated with Jet tagging in hadron collisions. In this review, various state-of-the-art (SOTA) techniques in ML and DL are examined, with a focus on their implications for HEP demands. More precisely, this discussion addresses various applications in extensive detail, such as Jet tagging, Jet tracking, and particle classification. The review concludes with an analysis of the current state of HEP using DL methodologies. It highlights the challenges and potential areas for future research, which are illustrated for each application.